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Microsatellite null alleles affected population genetic analyses: a case study of Maire yew (Taxus chinensis var. mairei)

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成果类型:
期刊论文
作者:
Wu, Xingtong;Wang, Libao;Zhang, Donglin;Wen, Yafeng*
通讯作者:
Wen, Yafeng
作者机构:
[Wu, Xingtong; Wen, Yafeng] Cent South Univ Forestry & Technol, Coll Landscape Architecture, Changsha 410004, Hunan, Peoples R China
[Wang, Libao] Cent South Univ Forestry & Technol, Coll Forestry, Changsha, Hunan, Peoples R China
[Zhang, Donglin] Univ Georgia, Coll Agr & Environm Sci, Athens, GA 30602 USA
通讯机构:
[Wen, Yafeng] C
Cent South Univ Forestry & Technol, Coll Landscape Architecture, Changsha 410004, Hunan, Peoples R China.
语种:
英文
关键词:
DNA sequences;Forestry;Genes;Value engineering;Hardy-Weinberg deviation;Maire yew;Microsatellite markers;Null alleles;population genetic;Population statistics;allele;genetic analysis;genetic differentiation;genetic marker;heterozygosity;population genetics;shrub;Alleles;Data;Equilibrium;Forestry;Genes;Primers;Set;Taxus;Taxus;Taxus wallichiana var. mairei
期刊:
Journal of Forest Research
ISSN:
1341-6979
年:
2019
卷:
24
期:
4
页码:
230-234
基金类别:
This work was supported by the National Natural Science Foundation of China (NSFC) [31470666]. This work was supported by the National Natural Science Foundation of China under Grant (31470666); JSPS Fellows under Grant (11F00787).Supported by Hunan Provincial Innovation Foundation for Postgraduate. Supported by Scientific Innovation Fund for Graduate of Central South University of Forestry and Technology. This work was supported by the National Natural Science Foundation of China (NSFC) [31470666]. This work was supported by the National Natural Science Foundation of China under Grant (31470666); JSPS Fellows under Grant (11F00787).Supported by Hunan Provincial Innovation Foundation for Postgraduate. Supported by Scientific Innovation Fund for Graduate of Central South University of Forestry and Technology. Part of the experiment was finished in the forest genetics laboratory of Forestry and Forest Products Research Institute of Japan. We are grateful to Dr. Saneyoshi Ueno for his help with the design of new primers and to Dr. Markus Ruhsam for checking the English.
机构署名:
本校为第一且通讯机构
院系归属:
林学院
风景园林学院
摘要:
Microsatellite markers are widely used in population genetic analyses. However, the common occurrence of null alleles and their effect on population parameters such as observed heterozygosity, genetic differentiation coefficient, etc., needs to be addressed. Two microsatellite data sets based on original and redesigned primers were used to assess the effect of null alleles on population genetic analyses of Maire yew (Taxus chinensis var. mairei). When amplified with the original primer set, both loci exhibited the presence of null alleles. Four...

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